Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 KRT90P-201ENST00000549264 1064 ntBASIC13.67□□□□□ -0.22
RNF144AP50876 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.67□□□□□ -0.22
RNF144AP50876 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 AC138696.2-201ENST00000607376 223 ntBASIC13.67□□□□□ -0.22
RNF144AP50876 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 AC011498.7-201ENST00000624986 2027 ntBASIC13.66□□□□□ -0.22
RNF144AP50876 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RNF144AP50876 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 PDIA3P1-201ENST00000471856 1510 ntBASIC13.66□□□□□ -0.22
RNF144AP50876 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RNF144AP50876 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 AC112492.5-201ENST00000421897 457 ntBASIC13.66□□□□□ -0.22
RNF144AP50876 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 AC016694.1-201ENST00000434179 700 ntBASIC13.66□□□□□ -0.22
RNF144AP50876 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.66□□□□□ -0.22
RNF144AP50876 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.66□□□□□ -0.22
RNF144AP50876 MESTP3-201ENST00000503460 968 ntBASIC13.66□□□□□ -0.22
RNF144AP50876 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.66□□□□□ -0.22
RNF144AP50876 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC13.66□□□□□ -0.22
RNF144AP50876 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.66□□□□□ -0.22
RNF144AP50876 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.66□□□□□ -0.22
RNF144AP50876 RN7SL48P-201ENST00000579283 293 ntBASIC13.66□□□□□ -0.22
RNF144AP50876 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 AL035252.4-201ENST00000624174 288 ntBASIC13.66□□□□□ -0.22
RNF144AP50876 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.66□□□□□ -0.22
RNF144AP50876 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF144AP50876 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RNF144AP50876 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNF144AP50876 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms