Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.97□□□□□ -0.33
LHX2P50458 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.97□□□□□ -0.33
LHX2P50458 RHOQP1-201ENST00000555758 579 ntBASIC12.97□□□□□ -0.33
LHX2P50458 MIR4754-201ENST00000582477 89 ntBASIC12.97□□□□□ -0.33
LHX2P50458 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.97□□□□□ -0.33
LHX2P50458 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LHX2P50458 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LHX2P50458 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
LHX2P50458 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.97□□□□□ -0.33
LHX2P50458 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.97□□□□□ -0.33
LHX2P50458 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LHX2P50458 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LHX2P50458 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LHX2P50458 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.97□□□□□ -0.33
LHX2P50458 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LHX2P50458 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LHX2P50458 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LHX2P50458 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
LHX2P50458 AC007686.3-201ENST00000619017 3487 ntBASIC12.97□□□□□ -0.33
LHX2P50458 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.97□□□□□ -0.33
LHX2P50458 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LHX2P50458 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LHX2P50458 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LHX2P50458 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.97□□□□□ -0.33
LHX2P50458 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LHX2P50458 AC232323.1-201ENST00000540724 2099 ntBASIC12.97□□□□□ -0.33
LHX2P50458 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LHX2P50458 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.96□□□□□ -0.33
LHX2P50458 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.96□□□□□ -0.33
LHX2P50458 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LHX2P50458 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
LHX2P50458 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.96□□□□□ -0.33
LHX2P50458 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
LHX2P50458 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 RNA5SP359-201ENST00000364838 113 ntBASIC12.96□□□□□ -0.33
LHX2P50458 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.96□□□□□ -0.33
LHX2P50458 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.96□□□□□ -0.33
LHX2P50458 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.96□□□□□ -0.33
LHX2P50458 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.96□□□□□ -0.33
LHX2P50458 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.96□□□□□ -0.33
LHX2P50458 AC116345.2-201ENST00000512837 523 ntBASIC12.96□□□□□ -0.33
LHX2P50458 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.96□□□□□ -0.33
LHX2P50458 RTN3P1-201ENST00000536295 711 ntBASIC12.96□□□□□ -0.33
LHX2P50458 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.96□□□□□ -0.33
LHX2P50458 AC242376.1-201ENST00000559033 726 ntBASIC12.96□□□□□ -0.33
LHX2P50458 AC140658.4-201ENST00000561990 352 ntBASIC12.96□□□□□ -0.33
LHX2P50458 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 AL022334.2-201ENST00000610000 484 ntBASIC12.96□□□□□ -0.33
LHX2P50458 AC079336.7-201ENST00000623428 1078 ntBASIC12.96□□□□□ -0.33
LHX2P50458 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LHX2P50458 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LHX2P50458 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LHX2P50458 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.96□□□□□ -0.34
LHX2P50458 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LHX2P50458 AC015909.3-201ENST00000572855 1794 ntBASIC12.96□□□□□ -0.34
LHX2P50458 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LHX2P50458 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LHX2P50458 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LHX2P50458 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LHX2P50458 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LHX2P50458 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LHX2P50458 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.96□□□□□ -0.34
LHX2P50458 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LHX2P50458 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.96□□□□□ -0.34
LHX2P50458 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.96□□□□□ -0.34
LHX2P50458 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.96□□□□□ -0.34
LHX2P50458 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LHX2P50458 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 AC097359.2-201ENST00000604992 2389 ntBASIC12.95□□□□□ -0.34
LHX2P50458 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.95□□□□□ -0.34
LHX2P50458 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 LINC00552-201ENST00000625151 2579 ntBASIC12.95□□□□□ -0.34
LHX2P50458 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms