Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AL391280.1-201ENST00000506969 1062 ntBASIC14.22□□□□□ -0.13
KRT6CP48668 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.22□□□□□ -0.13
KRT6CP48668 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KRT6CP48668 SORD2P-201ENST00000558556 1069 ntBASIC14.22□□□□□ -0.13
KRT6CP48668 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.22□□□□□ -0.13
KRT6CP48668 AC027307.3-201ENST00000594262 1100 ntBASIC14.22□□□□□ -0.13
KRT6CP48668 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6CP48668 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6CP48668 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6CP48668 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KRT6CP48668 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6CP48668 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
KRT6CP48668 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.22□□□□□ -0.13
KRT6CP48668 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6CP48668 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
KRT6CP48668 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.22□□□□□ -0.13
KRT6CP48668 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6CP48668 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
KRT6CP48668 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.21□□□□□ -0.13
KRT6CP48668 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.21□□□□□ -0.13
KRT6CP48668 C2orf27AP3-201ENST00000434123 579 ntBASIC14.21□□□□□ -0.13
KRT6CP48668 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.21□□□□□ -0.13
KRT6CP48668 AC106760.1-201ENST00000508690 800 ntBASIC14.21□□□□□ -0.13
KRT6CP48668 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.21□□□□□ -0.13
KRT6CP48668 AP001889.1-201ENST00000525414 633 ntBASIC14.21□□□□□ -0.13
KRT6CP48668 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 AL354718.3-201ENST00000616414 581 ntBASIC14.21□□□□□ -0.13
KRT6CP48668 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 RPSAP52-203ENST00000622976 1023 ntBASIC14.21□□□□□ -0.13
KRT6CP48668 CR382287.1-201ENST00000623954 586 ntBASIC14.21□□□□□ -0.13
KRT6CP48668 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KRT6CP48668 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
KRT6CP48668 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6CP48668 AL590440.2-201ENST00000641973 1595 ntBASIC14.21□□□□□ -0.14
KRT6CP48668 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
KRT6CP48668 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KRT6CP48668 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
KRT6CP48668 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
KRT6CP48668 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.2□□□□□ -0.14
KRT6CP48668 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
KRT6CP48668 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
KRT6CP48668 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.2□□□□□ -0.14
KRT6CP48668 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRT6CP48668 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms