Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.65■□□□□ 0.1
SSR1P43307 HSPA7-201ENST00000445535 1927 ntBASIC15.65■□□□□ 0.1
SSR1P43307 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SSR1P43307 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.65■□□□□ 0.1
SSR1P43307 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SSR1P43307 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.65■□□□□ 0.1
SSR1P43307 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.65■□□□□ 0.1
SSR1P43307 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.65■□□□□ 0.1
SSR1P43307 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.65■□□□□ 0.1
SSR1P43307 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.65■□□□□ 0.1
SSR1P43307 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 COL6A4P2-202ENST00000504443 2753 ntBASIC15.65■□□□□ 0.1
SSR1P43307 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.65■□□□□ 0.1
SSR1P43307 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SSR1P43307 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 MSTO2P-201ENST00000314835 1709 ntBASIC15.65■□□□□ 0.1
SSR1P43307 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SSR1P43307 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.65■□□□□ 0.1
SSR1P43307 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR1P43307 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
SSR1P43307 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SSR1P43307 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SSR1P43307 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 AC092135.3-201ENST00000624151 1846 ntBASIC15.64■□□□□ 0.09
SSR1P43307 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SSR1P43307 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.64■□□□□ 0.09
SSR1P43307 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR1P43307 AC152010.1-201ENST00000415779 2006 ntBASIC15.64■□□□□ 0.09
SSR1P43307 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 TDH-203ENST00000531764 1110 ntBASIC15.64■□□□□ 0.09
SSR1P43307 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.64■□□□□ 0.09
SSR1P43307 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR1P43307 TP53TG3HP-202ENST00000569755 579 ntBASIC15.64■□□□□ 0.09
SSR1P43307 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.64■□□□□ 0.09
SSR1P43307 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SSR1P43307 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR1P43307 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SSR1P43307 AC003102.2-201ENST00000589195 1469 ntBASIC15.64■□□□□ 0.09
SSR1P43307 AC134312.5-201ENST00000568031 1313 ntBASIC15.64■□□□□ 0.09
SSR1P43307 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR1P43307 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR1P43307 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.63■□□□□ 0.09
SSR1P43307 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR1P43307 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR1P43307 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SSR1P43307 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR1P43307 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SSR1P43307 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR1P43307 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR1P43307 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 1333.7 ms