Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.99□□□□□ -0.17
KRT20P35900 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KRT20P35900 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
KRT20P35900 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.99□□□□□ -0.17
KRT20P35900 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT20P35900 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT20P35900 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT20P35900 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 AC023090.2-201ENST00000625182 2110 ntBASIC13.99□□□□□ -0.17
KRT20P35900 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT20P35900 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
KRT20P35900 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 AC063926.2-201ENST00000623766 1308 ntBASIC13.98□□□□□ -0.17
KRT20P35900 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT20P35900 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT20P35900 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT20P35900 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT20P35900 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.98□□□□□ -0.17
KRT20P35900 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT20P35900 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT20P35900 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT20P35900 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 AC145423.3-201ENST00000615987 467 ntBASIC13.98□□□□□ -0.17
KRT20P35900 IGHV3-72-202ENST00000621503 303 ntBASIC13.98□□□□□ -0.17
KRT20P35900 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT20P35900 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT20P35900 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT20P35900 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT20P35900 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
KRT20P35900 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT20P35900 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
KRT20P35900 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT20P35900 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT20P35900 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms