Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.75□□□□□ -0.05
PTPN4P29074 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN4P29074 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.75□□□□□ -0.05
PTPN4P29074 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN4P29074 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.75□□□□□ -0.05
PTPN4P29074 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN4P29074 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN4P29074 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
PTPN4P29074 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PTPN4P29074 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTPN4P29074 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN4P29074 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
PTPN4P29074 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN4P29074 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN4P29074 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN4P29074 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN4P29074 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PTPN4P29074 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.74□□□□□ -0.05
PTPN4P29074 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 AC022494.1-201ENST00000466044 728 ntBASIC14.74□□□□□ -0.05
PTPN4P29074 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.74□□□□□ -0.05
PTPN4P29074 AC068587.3-201ENST00000526613 355 ntBASIC14.74□□□□□ -0.05
PTPN4P29074 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.74□□□□□ -0.05
PTPN4P29074 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 AC009486.1-201ENST00000569860 813 ntBASIC14.74□□□□□ -0.05
PTPN4P29074 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.74□□□□□ -0.05
PTPN4P29074 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PTPN4P29074 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.74□□□□□ -0.05
PTPN4P29074 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTPN4P29074 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.73□□□□□ -0.05
PTPN4P29074 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN4P29074 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.73□□□□□ -0.05
PTPN4P29074 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PTPN4P29074 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.73□□□□□ -0.05
PTPN4P29074 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PTPN4P29074 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN4P29074 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN4P29074 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PTPN4P29074 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms