Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNAP12004 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 RN7SKP230-201ENST00000365642 335 ntBASIC14.31□□□□□ -0.12
PCNAP12004 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNAP12004 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNAP12004 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNAP12004 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 AL590640.2-201ENST00000457038 527 ntBASIC14.31□□□□□ -0.12
PCNAP12004 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 MESTP3-201ENST00000503460 968 ntBASIC14.31□□□□□ -0.12
PCNAP12004 USP32P1-208ENST00000506594 1164 ntBASIC14.31□□□□□ -0.12
PCNAP12004 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNAP12004 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 AC025279.2-201ENST00000569730 653 ntBASIC14.31□□□□□ -0.12
PCNAP12004 AC233724.13-201ENST00000598383 410 ntBASIC14.31□□□□□ -0.12
PCNAP12004 AL022328.1-201ENST00000610050 478 ntBASIC14.31□□□□□ -0.12
PCNAP12004 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCNAP12004 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNAP12004 MRPL37P1-201ENST00000592451 1337 ntBASIC14.31□□□□□ -0.12
PCNAP12004 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNAP12004 MST1P2-201ENST00000457982 2291 ntBASIC14.31□□□□□ -0.12
PCNAP12004 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 CU639417.3-201ENST00000624240 1404 ntBASIC14.31□□□□□ -0.12
PCNAP12004 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNAP12004 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 AC015688.4-201ENST00000580780 1647 ntBASIC14.3□□□□□ -0.12
PCNAP12004 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
PCNAP12004 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 KRT17P7-201ENST00000451704 1104 ntBASIC14.3□□□□□ -0.12
PCNAP12004 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.3□□□□□ -0.12
PCNAP12004 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 FTH1P14-201ENST00000482930 551 ntBASIC14.3□□□□□ -0.12
PCNAP12004 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.3□□□□□ -0.12
PCNAP12004 AL391280.1-201ENST00000506969 1062 ntBASIC14.3□□□□□ -0.12
PCNAP12004 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.3□□□□□ -0.12
PCNAP12004 AC131206.1-201ENST00000538078 1211 ntBASIC14.3□□□□□ -0.12
PCNAP12004 GNRHR2-203ENST00000581100 1187 ntBASIC14.3□□□□□ -0.12
PCNAP12004 AC138696.2-201ENST00000607376 223 ntBASIC14.3□□□□□ -0.12
PCNAP12004 IGHV3-72-202ENST00000621503 303 ntBASIC14.3□□□□□ -0.12
PCNAP12004 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
PCNAP12004 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 AC011474.4-201ENST00000623523 2076 ntBASIC14.3□□□□□ -0.12
PCNAP12004 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.3□□□□□ -0.12
PCNAP12004 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PCNAP12004 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNAP12004 DMBT1P1-203ENST00000636837 4628 ntBASIC14.3□□□□□ -0.12
PCNAP12004 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms