Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC11.44□□□□□ -0.58
CD28P10747 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.44□□□□□ -0.58
CD28P10747 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
CD28P10747 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.44□□□□□ -0.58
CD28P10747 AC144522.1-201ENST00000625111 1658 ntBASIC11.44□□□□□ -0.58
CD28P10747 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.44□□□□□ -0.58
CD28P10747 UFM1-202ENST00000379649 846 ntTSL 4 BASIC11.44□□□□□ -0.58
CD28P10747 MIR33B-201ENST00000385104 96 ntBASIC11.44□□□□□ -0.58
CD28P10747 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC11.44□□□□□ -0.58
CD28P10747 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 AC078875.1-201ENST00000431907 724 ntBASIC11.44□□□□□ -0.58
CD28P10747 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC11.44□□□□□ -0.58
CD28P10747 AL645933.1-201ENST00000440087 609 ntBASIC11.44□□□□□ -0.58
CD28P10747 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 AC006122.1-201ENST00000493323 440 ntBASIC11.44□□□□□ -0.58
CD28P10747 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.44□□□□□ -0.58
CD28P10747 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC11.44□□□□□ -0.58
CD28P10747 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 NAT9-211ENST00000580632 799 ntTSL 3 BASIC11.44□□□□□ -0.58
CD28P10747 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC11.44□□□□□ -0.58
CD28P10747 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC11.44□□□□□ -0.58
CD28P10747 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 AC128714.1-201ENST00000637035 887 ntBASIC11.44□□□□□ -0.58
CD28P10747 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.44□□□□□ -0.58
CD28P10747 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.44□□□□□ -0.58
CD28P10747 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 KRT8P21-201ENST00000430398 1491 ntBASIC11.44□□□□□ -0.58
CD28P10747 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CD28P10747 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 AC138035.3-201ENST00000622706 2791 ntBASIC11.44□□□□□ -0.58
CD28P10747 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD28P10747 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CD28P10747 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.43□□□□□ -0.58
CD28P10747 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.43□□□□□ -0.58
CD28P10747 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
CD28P10747 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CD28P10747 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CD28P10747 AC239868.1-201ENST00000369385 493 ntBASIC11.43□□□□□ -0.58
CD28P10747 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD28P10747 MPV17-204ENST00000399052 749 ntTSL 4 BASIC11.43□□□□□ -0.58
CD28P10747 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms