Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 AC074338.1-201ENST00000416825 156 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 KRT18P64-201ENST00000434946 1219 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 TIMM17BP1-201ENST00000545713 516 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 AC026150.2-201ENST00000564693 1156 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 MIR4453-201ENST00000584019 89 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 AC025048.3-201ENST00000590609 569 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 AC004835.2-201ENST00000603762 682 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 AC005702.4-201ENST00000618393 416 ntBASIC10.97□□□□□ -0.65
SMIM17P0DL12 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SMIM17P0DL12 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM17P0DL12 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 AL360270.3-201ENST00000609118 1348 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 TOMM22P5-201ENST00000416399 439 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 DNAJB3-201ENST00000446806 729 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SMIM17P0DL12 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 RN7SL618P-201ENST00000477850 296 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 KRT18P58-201ENST00000527480 1120 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms