Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
FREM3P0C091 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
FREM3P0C091 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.22□□□□□ -0.29
FREM3P0C091 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.22□□□□□ -0.29
FREM3P0C091 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.22□□□□□ -0.29
FREM3P0C091 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 FAM90A7P-201ENST00000382628 1395 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 FAM90A23P-201ENST00000400136 1395 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
FREM3P0C091 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.22□□□□□ -0.29
FREM3P0C091 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 AC021723.1-201ENST00000486306 515 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 AC245884.6-201ENST00000515672 1067 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.22□□□□□ -0.29
FREM3P0C091 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.22□□□□□ -0.29
FREM3P0C091 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.22□□□□□ -0.29
FREM3P0C091 AC008825.2-201ENST00000603374 718 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.22□□□□□ -0.29
FREM3P0C091 AC015967.2-201ENST00000624092 234 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 AC006435.4-201ENST00000625037 234 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.22□□□□□ -0.29
FREM3P0C091 AL356737.1-201ENST00000634391 234 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 AL928921.2-201ENST00000641325 2442 ntBASIC13.22□□□□□ -0.29
FREM3P0C091 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
FREM3P0C091 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM3P0C091 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.22□□□□□ -0.29
FREM3P0C091 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM3P0C091 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM3P0C091 LINC01165-201ENST00000445190 1623 ntBASIC13.21□□□□□ -0.29
FREM3P0C091 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM3P0C091 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
FREM3P0C091 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.21□□□□□ -0.29
FREM3P0C091 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.21□□□□□ -0.29
FREM3P0C091 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM3P0C091 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.21□□□□□ -0.29
FREM3P0C091 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.21□□□□□ -0.29
FREM3P0C091 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.21□□□□□ -0.29
FREM3P0C091 AC105129.2-201ENST00000559536 390 ntBASIC13.21□□□□□ -0.29
FREM3P0C091 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.21□□□□□ -0.29
FREM3P0C091 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
FREM3P0C091 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
FREM3P0C091 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.21□□□□□ -0.29
FREM3P0C091 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.21□□□□□ -0.29
FREM3P0C091 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
FREM3P0C091 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM3P0C091 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FREM3P0C091 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
FREM3P0C091 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM3P0C091 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms