Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC069120.2-201ENST00000524091 540 ntBASIC16.44■□□□□ 0.22
TPM3P06753 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.44■□□□□ 0.22
TPM3P06753 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.44■□□□□ 0.22
TPM3P06753 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.44■□□□□ 0.22
TPM3P06753 AC036164.1-201ENST00000570544 333 ntBASIC16.44■□□□□ 0.22
TPM3P06753 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.44■□□□□ 0.22
TPM3P06753 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.44■□□□□ 0.22
TPM3P06753 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TPM3P06753 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.44■□□□□ 0.22
TPM3P06753 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM3P06753 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TPM3P06753 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TPM3P06753 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 AL139385.1-201ENST00000611744 3272 ntBASIC16.43■□□□□ 0.22
TPM3P06753 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 AC024075.2-201ENST00000598112 1473 ntBASIC16.43■□□□□ 0.22
TPM3P06753 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.43■□□□□ 0.22
TPM3P06753 AC254562.1-201ENST00000417586 456 ntBASIC16.43■□□□□ 0.22
TPM3P06753 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.43■□□□□ 0.22
TPM3P06753 TLE1P1-201ENST00000422965 589 ntBASIC16.43■□□□□ 0.22
TPM3P06753 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.43■□□□□ 0.22
TPM3P06753 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 AC125807.1-201ENST00000483097 614 ntBASIC16.43■□□□□ 0.22
TPM3P06753 RPL13AP25-201ENST00000484130 612 ntBASIC16.43■□□□□ 0.22
TPM3P06753 AC026410.3-201ENST00000514280 936 ntBASIC16.43■□□□□ 0.22
TPM3P06753 AC027369.6-201ENST00000525520 931 ntBASIC16.43■□□□□ 0.22
TPM3P06753 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.43■□□□□ 0.22
TPM3P06753 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.43■□□□□ 0.22
TPM3P06753 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TPM3P06753 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 MIR497HG-202ENST00000572453 3838 ntBASIC16.43■□□□□ 0.22
TPM3P06753 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.43■□□□□ 0.22
TPM3P06753 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
TPM3P06753 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.43■□□□□ 0.22
TPM3P06753 AL603764.1-201ENST00000636452 321 ntBASIC16.43■□□□□ 0.22
TPM3P06753 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 TSN-212ENST00000536142 3328 ntTSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TPM3P06753 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TPM3P06753 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TPM3P06753 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 MKRN5P-201ENST00000445263 1467 ntBASIC16.42■□□□□ 0.22
TPM3P06753 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 SALL4P5-201ENST00000419001 1760 ntBASIC16.42■□□□□ 0.22
TPM3P06753 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 AC114501.2-201ENST00000439631 535 ntBASIC16.42■□□□□ 0.22
TPM3P06753 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.42■□□□□ 0.22
TPM3P06753 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.42■□□□□ 0.22
TPM3P06753 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.42■□□□□ 0.22
TPM3P06753 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms