Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 MRPL3P1-201ENST00000400109 1033 ntBASIC10.67□□□□□ -0.7
TNFRSF6BO95407 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 AC012183.1-201ENST00000625197 499 ntBASIC10.67□□□□□ -0.7
TNFRSF6BO95407 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 AC135782.3-201ENST00000562782 2105 ntBASIC10.67□□□□□ -0.7
TNFRSF6BO95407 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
TNFRSF6BO95407 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 TUBB8P4-201ENST00000511806 1324 ntBASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AC093525.8-201ENST00000624099 1342 ntBASIC10.66□□□□□ -0.7
TNFRSF6BO95407 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AL645937.2-201ENST00000396808 931 ntBASIC10.66□□□□□ -0.7
TNFRSF6BO95407 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 FAAHP1-202ENST00000446499 1238 ntBASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.66□□□□□ -0.7
TNFRSF6BO95407 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms