Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFS3O75489 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFS3O75489 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFS3O75489 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFS3O75489 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 AC009093.10-201ENST00000641956 1442 ntBASIC14.59□□□□□ -0.07
NDUFS3O75489 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFS3O75489 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.59□□□□□ -0.07
NDUFS3O75489 CICP12-201ENST00000455801 843 ntBASIC14.59□□□□□ -0.07
NDUFS3O75489 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 C2orf69P2-201ENST00000562032 1123 ntBASIC14.59□□□□□ -0.07
NDUFS3O75489 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFS3O75489 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 AL512343.1-201ENST00000605837 169 ntBASIC14.59□□□□□ -0.07
NDUFS3O75489 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.59□□□□□ -0.07
NDUFS3O75489 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.59□□□□□ -0.07
NDUFS3O75489 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.59□□□□□ -0.07
NDUFS3O75489 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFS3O75489 KRT8P28-201ENST00000433288 1390 ntBASIC14.59□□□□□ -0.07
NDUFS3O75489 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NDUFS3O75489 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.59□□□□□ -0.07
NDUFS3O75489 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFS3O75489 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NDUFS3O75489 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFS3O75489 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFS3O75489 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.58□□□□□ -0.07
NDUFS3O75489 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFS3O75489 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 AC020910.6-201ENST00000623084 1459 ntBASIC14.58□□□□□ -0.08
NDUFS3O75489 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFS3O75489 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFS3O75489 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFS3O75489 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
NDUFS3O75489 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.58□□□□□ -0.08
NDUFS3O75489 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFS3O75489 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.58□□□□□ -0.08
NDUFS3O75489 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFS3O75489 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFS3O75489 CNN2P10-201ENST00000443067 918 ntBASIC14.58□□□□□ -0.08
NDUFS3O75489 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.58□□□□□ -0.08
NDUFS3O75489 AC027237.1-201ENST00000560942 655 ntBASIC14.58□□□□□ -0.08
NDUFS3O75489 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFS3O75489 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.58□□□□□ -0.08
NDUFS3O75489 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFS3O75489 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFS3O75489 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFS3O75489 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms