Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXN3O00409 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FOXN3O00409 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.61■□□□□ 0.09
FOXN3O00409 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXN3O00409 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.61■□□□□ 0.09
FOXN3O00409 AC132192.2-201ENST00000596206 1147 ntBASIC15.61■□□□□ 0.09
FOXN3O00409 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXN3O00409 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 TUBB8P4-201ENST00000511806 1324 ntBASIC15.61■□□□□ 0.09
FOXN3O00409 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXN3O00409 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXN3O00409 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXN3O00409 ST20-AS1-201ENST00000560255 4223 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
FOXN3O00409 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXN3O00409 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 AC089987.1-201ENST00000551654 2209 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 AC104581.4-201ENST00000623126 3052 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXN3O00409 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FOXN3O00409 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXN3O00409 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXN3O00409 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 AL157407.1-201ENST00000435784 904 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 AL645933.1-201ENST00000440087 609 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXN3O00409 AC104989.1-201ENST00000519711 778 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.6■□□□□ 0.09
FOXN3O00409 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXN3O00409 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXN3O00409 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
FOXN3O00409 AC009955.4-201ENST00000597192 544 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXN3O00409 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 AC244394.1-201ENST00000435000 1665 ntBASIC15.6■□□□□ 0.09
FOXN3O00409 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXN3O00409 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXN3O00409 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXN3O00409 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXN3O00409 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
FOXN3O00409 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
FOXN3O00409 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXN3O00409 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 AL365209.1-201ENST00000624418 6473 ntBASIC15.59■□□□□ 0.09
FOXN3O00409 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXN3O00409 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms