Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 RNU1-114P-201ENST00000365297 166 ntBASIC12.53□□□□□ -0.4
TMEM235A6NFC5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 KLF2P3-201ENST00000451977 1087 ntBASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AC131206.1-201ENST00000538078 1211 ntBASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AL445209.1-201ENST00000607269 3491 ntBASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM235A6NFC5 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM235A6NFC5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 KRT18P13-201ENST00000400056 1290 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 RPSAP43-201ENST00000402237 625 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 AC254562.1-201ENST00000417586 456 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 AC092580.3-201ENST00000430932 139 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 HLA-J-203ENST00000494367 1087 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 AC138761.1-201ENST00000584393 385 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 TUBB8P4-201ENST00000511806 1324 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 AC100757.3-201ENST00000622361 1406 ntBASIC12.52□□□□□ -0.41
TMEM235A6NFC5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM235A6NFC5 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms