Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL137783.1-201ENST00000623494 1896 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FAM86HP-204ENST00000513466 959 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC103810.3-201ENST00000583567 96 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 EEF1DP1-201ENST00000585891 896 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC244093.1-201ENST00000610837 814 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AGGF1P1-201ENST00000509500 2073 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC010327.5-201ENST00000586923 3061 ntBASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GOLGA2P4-201ENST00000441462 777 ntBASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC104306.2-201ENST00000451877 341 ntBASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 COX5BP1-201ENST00000507622 393 ntBASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AP006547.1-201ENST00000563435 692 ntBASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL603764.1-201ENST00000636452 321 ntBASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms