Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAV18A0A075B6X5 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 REXO1L1P-201ENST00000379010 6598 ntBASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AC003102.2-201ENST00000589195 1469 ntBASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AL139094.1-201ENST00000405549 1188 ntBASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AC022616.1-201ENST00000518688 554 ntBASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AL512356.2-201ENST00000546955 174 ntBASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AC092337.1-201ENST00000568699 1129 ntBASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV18A0A075B6X5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms