Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 BCRP2-202ENST00000447763 634 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 MESTP3-201ENST00000503460 968 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 FTLP10-202ENST00000505798 471 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 BCRP6-201ENST00000510112 632 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 BCRP7-201ENST00000511549 544 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CR383656.12-201ENST00000549567 513 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC004466.1-201ENST00000599515 1080 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC012645.4-201ENST00000610691 1061 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC138466.3-201ENST00000619983 221 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC099521.3-201ENST00000624251 2938 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AC113367.3-201ENST00000508316 1912 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AL731571.1-201ENST00000617058 5428 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 AL138725.1-201ENST00000407347 1314 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CLUHP2-201ENST00000426660 1303 ntBASIC11.09□□□□□ -0.63
HLA-DRB4X5D2U9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.08□□□□□ -0.63
HLA-DRB4X5D2U9 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
HLA-DRB4X5D2U9 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
HLA-DRB4X5D2U9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC092933.1-201ENST00000393644 945 ntBASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 TMEM14DP-201ENST00000422205 345 ntBASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 LINC02084-201ENST00000606069 1096 ntBASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC138696.2-201ENST00000607376 223 ntBASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 MST1P2-201ENST00000457982 2291 ntBASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC015909.5-201ENST00000624336 2266 ntBASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 DMBT1P1-203ENST00000636837 4628 ntBASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HLA-DRB4X5D2U9 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms