Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 AL627223.1-201ENST00000416693 442 ntBASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 TPM4P1-201ENST00000436100 807 ntBASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 SPDYE14P-201ENST00000442619 822 ntBASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 CEND1P1-201ENST00000451006 455 ntBASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 RN7SL618P-201ENST00000477850 296 ntBASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 AL136172.1-201ENST00000598590 1394 ntBASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AC011700.1-201ENST00000610409 2627 ntBASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 ELL2P1-201ENST00000413990 1906 ntBASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 SALL4P5-201ENST00000419001 1760 ntBASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
KCNIP3Q9Y2W7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms