Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 AC044849.1-201ENST00000519737 1188 ntBASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 RN7SL371P-201ENST00000578099 267 ntBASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 AC007663.3-201ENST00000609632 465 ntBASIC15.02■□□□□ -0
FNDC3AQ9Y2H6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
FNDC3AQ9Y2H6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 AC020910.5-201ENST00000623668 1865 ntBASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 CYP46A4P-201ENST00000414953 267 ntBASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 HINT2P1-201ENST00000419438 481 ntBASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 AC016700.1-201ENST00000429424 312 ntBASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 FAM8A4P-201ENST00000435433 1213 ntBASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 NKAIN1P1-201ENST00000435754 582 ntBASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FNDC3AQ9Y2H6 AC017007.3-201ENST00000479865 435 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms