Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DTX4Q9Y2E6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DTX4Q9Y2E6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
DTX4Q9Y2E6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DTX4Q9Y2E6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AC012441.2-201ENST00000444843 739 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 RPL18P13-201ENST00000478088 569 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AC006122.1-201ENST00000493323 440 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 RBM8B-201ENST00000555532 525 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 RN7SL219P-201ENST00000582872 296 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AC005324.6-201ENST00000587972 613 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 MIR6799-201ENST00000620297 69 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AL008638.5-201ENST00000623814 1298 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AC144522.1-201ENST00000625111 1658 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 AC004899.1-201ENST00000424687 1714 ntBASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
DTX4Q9Y2E6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AC064801.2-201ENST00000625052 1303 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AL161932.2-201ENST00000435436 679 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 FAM58BP-201ENST00000439056 645 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 VDAC1P1-201ENST00000439229 848 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AC092658.1-201ENST00000505836 891 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 SCARNA21-201ENST00000517026 139 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 FAM8A2P-201ENST00000528813 1142 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 BNIP3P13-201ENST00000599968 566 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AC009884.2-201ENST00000603110 324 ntBASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
DTX4Q9Y2E6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms