Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX1-2Q9UD57 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 MSNP1-201ENST00000511640 1732 ntBASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 TFAMP1-201ENST00000412727 736 ntBASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 RPL13P2-201ENST00000440687 659 ntBASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AC105021.1-202ENST00000570572 669 ntBASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AC008620.2-201ENST00000510294 1569 ntBASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AC145098.2-201ENST00000623593 3026 ntBASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX1-2Q9UD57 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 AL158070.2-201ENST00000623713 1621 ntBASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 SORD2P-201ENST00000558556 1069 ntBASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 LINC01225-203ENST00000563550 1244 ntBASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 SALL4P5-201ENST00000419001 1760 ntBASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX1-2Q9UD57 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms