Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 NKAIN1P1-201ENST00000435754 582 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 AC005324.6-201ENST00000587972 613 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 MIR6720-201ENST00000611664 98 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 AC138649.2-201ENST00000615886 705 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 AL136295.7-201ENST00000619226 1200 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 AC004923.1-202ENST00000642106 209 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 AC139749.1-202ENST00000617529 3139 ntBASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF304Q9HCX3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AC013726.1-201ENST00000563747 2285 ntBASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AL008718.2-201ENST00000609206 1313 ntBASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 DPM3-202ENST00000368399 517 ntBASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 FNTAP2-201ENST00000430308 634 ntBASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZNF304Q9HCX3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZNF304Q9HCX3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms