Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CICP16-201ENST00000502609 2813 ntBASIC15.48■□□□□ 0.07
CD248Q9HCU0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 MST1P2-201ENST00000457982 2291 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 AL645937.2-201ENST00000396808 931 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 BTBD6P1-201ENST00000412176 1267 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 CNN2P10-201ENST00000443067 918 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 AC104306.2-201ENST00000451877 341 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 AL022328.3-201ENST00000607943 679 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 AC018735.1-201ENST00000437208 1502 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 AC015818.8-201ENST00000587907 1519 ntBASIC15.47■□□□□ 0.07
CD248Q9HCU0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.47■□□□□ 0.07
CD248Q9HCU0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CD248Q9HCU0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AC084364.1-201ENST00000551967 1556 ntBASIC15.46■□□□□ 0.07
CD248Q9HCU0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 KRT8P14-201ENST00000414254 1442 ntBASIC15.46■□□□□ 0.07
CD248Q9HCU0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AP006547.1-201ENST00000563435 692 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms