Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 AC023141.7-201ENST00000430646 407 ntBASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 RPL35P9-201ENST00000446059 350 ntBASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 ABHD17AP9-201ENST00000561925 548 ntBASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 AL157414.3-201ENST00000624276 1954 ntBASIC16.06■□□□□ 0.16
UBE2OQ9C0C9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 NHP2P1-201ENST00000335274 462 ntBASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 RN7SKP109-201ENST00000410592 316 ntBASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.05■□□□□ 0.16
UBE2OQ9C0C9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 CTBP2P8-201ENST00000422584 1330 ntBASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 CICP12-201ENST00000455801 843 ntBASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 AC004686.1-201ENST00000605113 538 ntBASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
UBE2OQ9C0C9 AC073347.1-201ENST00000421633 2643 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms