Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.06□□□□□ -0.16
CDC6Q99741 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC6Q99741 AC140113.1-201ENST00000603467 169 ntBASIC14.06□□□□□ -0.16
CDC6Q99741 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC6Q99741 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC6Q99741 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC6Q99741 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC6Q99741 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC6Q99741 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CDC6Q99741 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CDC6Q99741 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC6Q99741 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC6Q99741 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CDC6Q99741 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDC6Q99741 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.06□□□□□ -0.16
CDC6Q99741 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC6Q99741 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC6Q99741 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CDC6Q99741 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC6Q99741 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDC6Q99741 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 IL9RP3-201ENST00000442856 1674 ntBASIC14.05□□□□□ -0.16
CDC6Q99741 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDC6Q99741 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC6Q99741 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC6Q99741 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC6Q99741 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.05□□□□□ -0.16
CDC6Q99741 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC6Q99741 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC6Q99741 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC6Q99741 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.05□□□□□ -0.16
CDC6Q99741 AC124068.2-201ENST00000569473 1109 ntBASIC14.05□□□□□ -0.16
CDC6Q99741 RN7SL596P-201ENST00000582123 288 ntBASIC14.05□□□□□ -0.16
CDC6Q99741 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
CDC6Q99741 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC6Q99741 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC6Q99741 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDC6Q99741 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC6Q99741 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC6Q99741 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC6Q99741 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.05□□□□□ -0.16
CDC6Q99741 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC6Q99741 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC6Q99741 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDC6Q99741 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.04□□□□□ -0.16
CDC6Q99741 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC6Q99741 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.04□□□□□ -0.16
CDC6Q99741 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.04□□□□□ -0.16
CDC6Q99741 AC073869.2-201ENST00000417338 1026 ntBASIC14.04□□□□□ -0.16
CDC6Q99741 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC6Q99741 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 RPL35P9-201ENST00000446059 350 ntBASIC14.04□□□□□ -0.16
CDC6Q99741 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.04□□□□□ -0.16
CDC6Q99741 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC6Q99741 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDC6Q99741 RPL18AP8-201ENST00000486071 528 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms