Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC023908.3-201ENST00000564211 3047 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL13Q99616 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.26□□□□□ -0.45
CCL13Q99616 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 MIR4783-201ENST00000580343 82 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC009955.4-201ENST00000597192 544 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL13Q99616 BX640514.1-201ENST00000583223 1918 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
CCL13Q99616 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.26□□□□□ -0.45
CCL13Q99616 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
CCL13Q99616 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 AL009178.2-201ENST00000597278 2719 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC015802.1-201ENST00000588104 1449 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCL13Q99616 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 AC244394.1-201ENST00000435000 1665 ntBASIC12.26□□□□□ -0.45
CCL13Q99616 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCL13Q99616 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 AC131212.3-201ENST00000624087 4219 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 AC117489.1-201ENST00000625169 3217 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 AC092053.3-201ENST00000641308 4975 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 MIR1908-201ENST00000410394 80 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL13Q99616 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.25□□□□□ -0.45
CCL13Q99616 AC007274.1-201ENST00000439805 662 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 AL591846.1-201ENST00000451736 433 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL13Q99616 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL13Q99616 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.25□□□□□ -0.45
CCL13Q99616 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL13Q99616 AC005730.2-201ENST00000564549 1184 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 MIR6720-201ENST00000611664 98 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 AL162426.1-201ENST00000624141 743 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.25□□□□□ -0.45
CCL13Q99616 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL13Q99616 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 AC009093.10-201ENST00000641956 1442 ntBASIC12.25□□□□□ -0.45
CCL13Q99616 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms