Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 CICP17-201ENST00000418553 2377 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC020910.5-201ENST00000623668 1865 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC111170.3-201ENST00000624282 2464 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 INGX-202ENST00000489074 768 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 AC005586.2-201ENST00000563946 837 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV9Q99603 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV9Q99603 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC007541.1-201ENST00000570282 1469 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 AC105206.1-202ENST00000314927 2368 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
TRGV9Q99603 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC009093.10-201ENST00000641956 1442 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 AC015909.5-201ENST00000624336 2266 ntBASIC11.42□□□□□ -0.58
TRGV9Q99603 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV9Q99603 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TRGV9Q99603 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV9Q99603 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TRGV9Q99603 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV9Q99603 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TRGV9Q99603 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV9Q99603 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
TRGV9Q99603 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV9Q99603 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV9Q99603 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
TRGV9Q99603 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TRGV9Q99603 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TRGV9Q99603 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV9Q99603 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 RN7SKP175-201ENST00000408472 289 ntBASIC11.41□□□□□ -0.58
TRGV9Q99603 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV9Q99603 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV9Q99603 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV9Q99603 ELK1P1-201ENST00000485699 580 ntBASIC11.41□□□□□ -0.58
TRGV9Q99603 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV9Q99603 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.41□□□□□ -0.58
TRGV9Q99603 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
TRGV9Q99603 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV9Q99603 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV9Q99603 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms