Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CRAMP1Q96RY5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.53■□□□□ 0.4
CRAMP1Q96RY5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 PDXDC2P-206ENST00000534700 1315 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AJ011931.1-201ENST00000618749 2492 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AC092573.1-201ENST00000433054 884 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 KRT18P46-201ENST00000435568 1279 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AC090136.2-201ENST00000517809 420 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 TREHP1-201ENST00000531328 465 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 GOLGA2P7-209ENST00000560408 745 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AP005212.2-201ENST00000584979 510 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AC010632.2-201ENST00000588369 1224 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 CYP4F36P-201ENST00000589193 186 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 AC006548.2-201ENST00000605217 529 ntBASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.52■□□□□ 0.4
CRAMP1Q96RY5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRAMP1Q96RY5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRAMP1Q96RY5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CRAMP1Q96RY5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CRAMP1Q96RY5 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.52■□□□□ 0.39
CRAMP1Q96RY5 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.52■□□□□ 0.39
CRAMP1Q96RY5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CRAMP1Q96RY5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 AC244197.1-201ENST00000456494 951 ntBASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 PRSS3P1-201ENST00000503996 742 ntBASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 SLC25A15P3-201ENST00000505530 290 ntBASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 VENTXP3-201ENST00000546480 773 ntBASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 HMGB1P24-201ENST00000611897 328 ntBASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRAMP1Q96RY5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 MIR566-201ENST00000385187 94 ntBASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 FAM86KP-201ENST00000509817 987 ntBASIC17.5■□□□□ 0.39
CRAMP1Q96RY5 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms