Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 VDAC1P1-201ENST00000439229 848 ntBASIC12.12□□□□□ -0.47
GAFA1Q96PS6 AC007274.1-201ENST00000439805 662 ntBASIC12.12□□□□□ -0.47
GAFA1Q96PS6 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 SCARNA21-201ENST00000517026 139 ntBASIC12.12□□□□□ -0.47
GAFA1Q96PS6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 AC104506.1-201ENST00000609247 429 ntBASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 SNX18-202ENST00000343017 3140 ntBASIC12.12□□□□□ -0.47
GAFA1Q96PS6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 HSPA8P5-201ENST00000456928 2069 ntBASIC12.12□□□□□ -0.47
GAFA1Q96PS6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 AC136759.1-202ENST00000530858 2194 ntBASIC12.11□□□□□ -0.47
GAFA1Q96PS6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 ST13P19-201ENST00000442505 1124 ntBASIC12.11□□□□□ -0.47
GAFA1Q96PS6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 SERPINA13P-202ENST00000478994 924 ntBASIC12.11□□□□□ -0.47
GAFA1Q96PS6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 AP000346.4-201ENST00000614827 381 ntBASIC12.11□□□□□ -0.47
GAFA1Q96PS6 AC004923.1-202ENST00000642106 209 ntBASIC12.11□□□□□ -0.47
GAFA1Q96PS6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms