Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AL589739.1-201ENST00000607720 493 ntBASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AL691403.2-201ENST00000618460 490 ntBASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 LINC00628-201ENST00000628516 1289 ntBASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP6Q96FZ7 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 POM121L14P-201ENST00000406100 1558 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 MKRN5P-201ENST00000445263 1467 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 DNAJB3-202ENST00000449667 1266 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AC004449.1-201ENST00000564240 433 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AC007967.4-201ENST00000614700 386 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AF228730.6-201ENST00000641497 218 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AC084121.3-201ENST00000641716 218 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AGAP12P-201ENST00000585227 2359 ntBASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP6Q96FZ7 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CHMP6Q96FZ7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 RPL13P2-201ENST00000440687 659 ntBASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP6Q96FZ7 AP006288.1-201ENST00000446065 395 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms