Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC104961.1-201ENST00000427605 771 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 AC113935.1-201ENST00000471722 555 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PRSS3P1-201ENST00000503996 742 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 BCL2L12P1-201ENST00000508390 733 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 MIR4265-201ENST00000582152 99 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 AC011462.4-201ENST00000616866 449 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PDXDC2P-206ENST00000534700 1315 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 STK24P1-201ENST00000455035 1291 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 AC092896.1-201ENST00000465850 380 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 RN7SL147P-201ENST00000487345 298 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 BCRP4-201ENST00000506079 804 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 HNRNPA1P5-201ENST00000558213 966 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 CES1P2-201ENST00000566467 1242 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 HYMAI-201ENST00000635591 3347 ntBASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM43Q96BQ3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 AC092573.1-201ENST00000433054 884 ntBASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 AC092903.1-201ENST00000466506 262 ntBASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 AC025186.1-201ENST00000478174 870 ntBASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 AC100858.1-201ENST00000514059 1228 ntBASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms