Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 NHP2P1-201ENST00000335274 462 ntBASIC14.31□□□□□ -0.12
CLDN23Q96B33 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 RN7SL128P-201ENST00000467883 305 ntBASIC14.31□□□□□ -0.12
CLDN23Q96B33 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 RN7SL288P-201ENST00000490496 291 ntBASIC14.31□□□□□ -0.12
CLDN23Q96B33 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 BCRP4-201ENST00000506079 804 ntBASIC14.31□□□□□ -0.12
CLDN23Q96B33 RN7SKP155-201ENST00000516031 288 ntBASIC14.31□□□□□ -0.12
CLDN23Q96B33 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 SORD2P-201ENST00000558556 1069 ntBASIC14.31□□□□□ -0.12
CLDN23Q96B33 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 FKBP4P8-201ENST00000610931 1369 ntBASIC14.31□□□□□ -0.12
CLDN23Q96B33 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.31□□□□□ -0.12
CLDN23Q96B33 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLDN23Q96B33 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 AC092570.1-201ENST00000414446 469 ntBASIC14.3□□□□□ -0.12
CLDN23Q96B33 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 AL512599.1-201ENST00000430724 685 ntBASIC14.3□□□□□ -0.12
CLDN23Q96B33 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 BRI3P1-201ENST00000440440 378 ntBASIC14.3□□□□□ -0.12
CLDN23Q96B33 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.3□□□□□ -0.12
CLDN23Q96B33 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 AC100858.1-201ENST00000514059 1228 ntBASIC14.3□□□□□ -0.12
CLDN23Q96B33 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.3□□□□□ -0.12
CLDN23Q96B33 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 MIR6816-201ENST00000620368 66 ntBASIC14.3□□□□□ -0.12
CLDN23Q96B33 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.3□□□□□ -0.12
CLDN23Q96B33 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms