Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 BRWD1P1-201ENST00000401091 371 ntBASIC16.43■□□□□ 0.22
TNFRSF25Q93038 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 KRT18P15-201ENST00000458108 1291 ntBASIC16.43■□□□□ 0.22
TNFRSF25Q93038 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 MIR4538-201ENST00000581377 78 ntBASIC16.43■□□□□ 0.22
TNFRSF25Q93038 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.43■□□□□ 0.22
TNFRSF25Q93038 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.42■□□□□ 0.22
TNFRSF25Q93038 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AC007274.1-201ENST00000439805 662 ntBASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AC006033.1-201ENST00000440505 426 ntBASIC16.42■□□□□ 0.22
TNFRSF25Q93038 PFN1P12-201ENST00000455938 534 ntBASIC16.42■□□□□ 0.22
TNFRSF25Q93038 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SHMT1P1-201ENST00000419974 1312 ntBASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AL359881.3-201ENST00000602640 1721 ntBASIC16.42■□□□□ 0.22
TNFRSF25Q93038 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFRSF25Q93038 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF25Q93038 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF25Q93038 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF25Q93038 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF25Q93038 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms