Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC9.53□□□□□ -0.88
SMIM11BQ8TCY0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 AC106818.1-201ENST00000623223 3242 ntBASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 GOLGA2P5-201ENST00000266746 2395 ntBASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 AL136172.1-201ENST00000598590 1394 ntBASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SMIM11BQ8TCY0 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 F2-205ENST00000530231 1849 ntTSL 5 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 TP73-203ENST00000357733 4899 ntTSL 5 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AL391647.1-201ENST00000395664 511 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 HLA-K-203ENST00000430151 1046 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AC009474.1-201ENST00000455096 1565 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 RNA5SP415-201ENST00000517246 115 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AC066615.1-201ENST00000640911 628 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AF228730.6-201ENST00000641497 218 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AC084121.3-201ENST00000641716 218 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 OR2I1P-208ENST00000641137 4948 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AL022323.5-201ENST00000624101 2059 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 Z97205.2-201ENST00000564697 1639 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 AC015688.4-201ENST00000580780 1647 ntBASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMIM11BQ8TCY0 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 KRT8P12-202ENST00000472924 1397 ntBASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SMIM11BQ8TCY0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms