Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AL138828.2-201ENST00000615812 383 ntBASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AC093028.1-201ENST00000622998 982 ntBASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AC099521.3-201ENST00000624251 2938 ntBASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.66□□□□□ -0.06
RAB3IL1Q8TBN0 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 HSPA8P5-201ENST00000456928 2069 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 AL139400.1-201ENST00000366220 510 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 AL139094.1-201ENST00000405549 1188 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 TSEN15P1-201ENST00000423257 515 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 CYMP-203ENST00000474680 1263 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 AC069262.1-201ENST00000539058 672 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 AC106028.4-201ENST00000614509 607 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 AC087499.5-201ENST00000452760 1342 ntBASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
RAB3IL1Q8TBN0 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
RAB3IL1Q8TBN0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RAB3IL1Q8TBN0 FAM90A12P-201ENST00000519497 2375 ntBASIC14.65□□□□□ -0.07
RAB3IL1Q8TBN0 FAM90A24P-201ENST00000520792 2369 ntBASIC14.65□□□□□ -0.07
RAB3IL1Q8TBN0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms