Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AL139094.1-201ENST00000405549 1188 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 MRPS18AP1-201ENST00000414458 589 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AC104596.2-201ENST00000512793 793 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AL390955.2-201ENST00000603032 514 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AC093512.1-201ENST00000617969 520 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AC007431.3-201ENST00000623221 587 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AC023794.5-201ENST00000564380 2157 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 CR383656.2-201ENST00000548656 2254 ntBASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DNAAF1Q8NEP3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 SPDYE19P-201ENST00000338590 713 ntBASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC134915.1-201ENST00000426461 574 ntBASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC055876.2-201ENST00000531834 546 ntBASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 DUX4L47-201ENST00000566374 394 ntBASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC120045.2-201ENST00000567334 178 ntBASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 INTS4P2-202ENST00000614726 2019 ntBASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC011498.7-201ENST00000624986 2027 ntBASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms