Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 TUBB8P8-201ENST00000458717 1058 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 FGFR3P5-201ENST00000564496 886 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 BNIP3P13-201ENST00000599968 566 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AC026740.1-201ENST00000607068 791 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AC090164.2-201ENST00000611487 516 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AC022748.3-201ENST00000621828 275 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 AL138725.1-201ENST00000407347 1314 ntBASIC15.42■□□□□ 0.06
TTC16Q8NEE8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC16Q8NEE8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC073957.3-201ENST00000609998 6758 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 DPM3-202ENST00000368399 517 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 KLF2P1-201ENST00000447438 1042 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 IMP3P2-201ENST00000489760 475 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC022217.1-201ENST00000521069 738 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC079328.1-201ENST00000560358 952 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 MIR4783-201ENST00000580343 82 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC005962.1-201ENST00000584100 773 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC138627.1-207ENST00000641560 1006 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC087386.2-201ENST00000623212 4637 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AC244394.1-201ENST00000435000 1665 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC16Q8NEE8 MROH4P-201ENST00000431302 1578 ntBASIC15.41■□□□□ 0.06
TTC16Q8NEE8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC16Q8NEE8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms