Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRC28Q86X40 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRC28Q86X40 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
LRRC28Q86X40 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRC28Q86X40 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRC28Q86X40 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LRRC28Q86X40 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRC28Q86X40 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRC28Q86X40 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRRC28Q86X40 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.08□□□□□ -0.31
LRRC28Q86X40 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LRRC28Q86X40 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
LRRC28Q86X40 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LRRC28Q86X40 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 BRI3BPP1-201ENST00000594224 787 ntBASIC13.08□□□□□ -0.32
LRRC28Q86X40 AC133539.2-201ENST00000604757 467 ntBASIC13.08□□□□□ -0.32
LRRC28Q86X40 WFDC1-204ENST00000613603 549 ntBASIC13.08□□□□□ -0.32
LRRC28Q86X40 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 CICP16-201ENST00000502609 2813 ntBASIC13.08□□□□□ -0.32
LRRC28Q86X40 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LRRC28Q86X40 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LRRC28Q86X40 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 Z82170.1-201ENST00000625081 3192 ntBASIC13.07□□□□□ -0.32
LRRC28Q86X40 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 INE1-201ENST00000456273 945 ntBASIC13.07□□□□□ -0.32
LRRC28Q86X40 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms