Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FO393414.2-201ENST00000405153 598 ntBASIC12.2□□□□□ -0.46
ZNF546Q86UE3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 AC145285.3-201ENST00000564603 959 ntBASIC12.2□□□□□ -0.46
ZNF546Q86UE3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 Z98257.2-202ENST00000641138 1548 ntBASIC12.2□□□□□ -0.46
ZNF546Q86UE3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AC007967.2-201ENST00000432613 625 ntBASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 RNA5SP419-201ENST00000515908 135 ntBASIC12.19□□□□□ -0.46
ZNF546Q86UE3 IGHV3-62-201ENST00000520057 340 ntBASIC12.19□□□□□ -0.46
ZNF546Q86UE3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 KRT8P23-201ENST00000560090 1207 ntBASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AP000842.3-202ENST00000569238 1080 ntBASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 AC015819.3-201ENST00000624305 2674 ntBASIC12.19□□□□□ -0.46
ZNF546Q86UE3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF546Q86UE3 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms