Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC244394.1-201ENST00000435000 1665 ntBASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC100827.2-201ENST00000563214 1194 ntBASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 MIR4538-201ENST00000581377 78 ntBASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC091271.1-201ENST00000611877 1162 ntBASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC005695.3-201ENST00000614522 232 ntBASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 LINC01230-201ENST00000625222 3017 ntBASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.71□□□□□ -0.05
LYSMD3Q7Z3D4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD3Q7Z3D4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD3Q7Z3D4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD3Q7Z3D4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 KLF2P1-201ENST00000447438 1042 ntBASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 MIR6720-201ENST00000611664 98 ntBASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 AL162426.1-201ENST00000624141 743 ntBASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD3Q7Z3D4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AC009093.10-201ENST00000641956 1442 ntBASIC14.69□□□□□ -0.06
LYSMD3Q7Z3D4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms