Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC068587.3-201ENST00000526613 355 ntBASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC010319.3-201ENST00000597028 470 ntBASIC14.08□□□□□ -0.16
RFTN2Q52LD8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AC087386.2-201ENST00000623212 4637 ntBASIC14.08□□□□□ -0.16
RFTN2Q52LD8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFTN2Q52LD8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 CICP17-201ENST00000418553 2377 ntBASIC14.07□□□□□ -0.16
RFTN2Q52LD8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 AC106760.1-201ENST00000508690 800 ntBASIC14.07□□□□□ -0.16
RFTN2Q52LD8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 AC106820.3-201ENST00000561653 397 ntBASIC14.07□□□□□ -0.16
RFTN2Q52LD8 MIR4745-201ENST00000577608 62 ntBASIC14.07□□□□□ -0.16
RFTN2Q52LD8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 AC132938.4-201ENST00000623835 848 ntBASIC14.07□□□□□ -0.16
RFTN2Q52LD8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RFTN2Q52LD8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 AGAP10P-201ENST00000454844 2418 ntBASIC14.06□□□□□ -0.16
RFTN2Q52LD8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFTN2Q52LD8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms