Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.45□□□□□ -0.42
EFNB3Q15768 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.45□□□□□ -0.42
EFNB3Q15768 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.45□□□□□ -0.42
EFNB3Q15768 POU5F1P2-201ENST00000521750 823 ntBASIC12.45□□□□□ -0.42
EFNB3Q15768 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 AC003686.1-201ENST00000550956 1034 ntBASIC12.45□□□□□ -0.42
EFNB3Q15768 AC027237.1-201ENST00000560942 655 ntBASIC12.45□□□□□ -0.42
EFNB3Q15768 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.45□□□□□ -0.42
EFNB3Q15768 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.45□□□□□ -0.42
EFNB3Q15768 AC097724.1-201ENST00000609581 426 ntBASIC12.45□□□□□ -0.42
EFNB3Q15768 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 SBF1P1-201ENST00000444527 5631 ntBASIC12.45□□□□□ -0.42
EFNB3Q15768 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.45□□□□□ -0.42
EFNB3Q15768 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
EFNB3Q15768 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
EFNB3Q15768 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.44□□□□□ -0.42
EFNB3Q15768 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.44□□□□□ -0.42
EFNB3Q15768 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 NUP210P1-202ENST00000504322 710 ntBASIC12.44□□□□□ -0.42
EFNB3Q15768 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.44□□□□□ -0.42
EFNB3Q15768 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 AC105129.2-201ENST00000559536 390 ntBASIC12.44□□□□□ -0.42
EFNB3Q15768 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 RN7SL574P-201ENST00000581512 297 ntBASIC12.44□□□□□ -0.42
EFNB3Q15768 MIR3188-201ENST00000583494 85 ntBASIC12.44□□□□□ -0.42
EFNB3Q15768 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.44□□□□□ -0.42
EFNB3Q15768 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 AC005912.2-201ENST00000619492 2400 ntBASIC12.44□□□□□ -0.42
EFNB3Q15768 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 AC018629.1-201ENST00000623381 1736 ntBASIC12.44□□□□□ -0.42
EFNB3Q15768 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.44□□□□□ -0.42
EFNB3Q15768 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
EFNB3Q15768 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
EFNB3Q15768 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
EFNB3Q15768 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.43□□□□□ -0.42
EFNB3Q15768 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
EFNB3Q15768 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
EFNB3Q15768 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms