Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 SERBP1P2-201ENST00000436888 1164 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP7AQ04656 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC20.93■□□□□ 0.94
ATP7AQ04656 HNRNPA1P56-201ENST00000505767 954 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC20.93■□□□□ 0.94
ATP7AQ04656 AC120498.7-201ENST00000562876 330 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 FAM187B2P-201ENST00000577135 713 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 AC113385.2-201ENST00000614465 762 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ATP7AQ04656 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ATP7AQ04656 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATP7AQ04656 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ATP7AQ04656 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ATP7AQ04656 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP7AQ04656 NHP2P1-201ENST00000335274 462 ntBASIC20.92■□□□□ 0.94
ATP7AQ04656 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 RHOC-205ENST00000369636 786 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP7AQ04656 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 USP17L6P-201ENST00000382470 1197 ntBASIC20.92■□□□□ 0.94
ATP7AQ04656 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP7AQ04656 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP7AQ04656 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP7AQ04656 BX322534.1-201ENST00000635574 241 ntBASIC20.92■□□□□ 0.94
ATP7AQ04656 AC215524.1-201ENST00000635696 241 ntBASIC20.92■□□□□ 0.94
ATP7AQ04656 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC20.92■□□□□ 0.94
ATP7AQ04656 MARS-233ENST00000628866 2583 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP7AQ04656 RN7SL832P-201ENST00000607781 1756 ntBASIC20.92■□□□□ 0.94
ATP7AQ04656 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ATP7AQ04656 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP7AQ04656 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ATP7AQ04656 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP7AQ04656 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
ATP7AQ04656 SALL4P6-201ENST00000429385 1691 ntBASIC20.91■□□□□ 0.94
ATP7AQ04656 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 AC090505.1-201ENST00000430515 1834 ntBASIC20.91■□□□□ 0.94
ATP7AQ04656 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP7AQ04656 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP7AQ04656 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ATP7AQ04656 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP7AQ04656 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP7AQ04656 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ATP7AQ04656 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP7AQ04656 AC008536.3-201ENST00000623282 1599 ntBASIC20.91■□□□□ 0.94
ATP7AQ04656 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATP7AQ04656 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP7AQ04656 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP7AQ04656 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ATP7AQ04656 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATP7AQ04656 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP7AQ04656 TCAF2P1-201ENST00000291129 2421 ntBASIC20.9■□□□□ 0.94
ATP7AQ04656 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP7AQ04656 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ATP7AQ04656 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP7AQ04656 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP7AQ04656 HNRNPA1P21-201ENST00000424115 961 ntBASIC20.9■□□□□ 0.94
ATP7AQ04656 AC092810.2-201ENST00000431570 362 ntBASIC20.9■□□□□ 0.94
ATP7AQ04656 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP7AQ04656 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP7AQ04656 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms