Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.73□□□□□ -0.37
UBA52P62987 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.73□□□□□ -0.37
UBA52P62987 ACTBP11-201ENST00000436287 1126 ntBASIC12.73□□□□□ -0.37
UBA52P62987 AC245100.3-201ENST00000441281 285 ntBASIC12.73□□□□□ -0.37
UBA52P62987 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.73□□□□□ -0.37
UBA52P62987 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.73□□□□□ -0.37
UBA52P62987 TPT1P11-201ENST00000458482 498 ntBASIC12.73□□□□□ -0.37
UBA52P62987 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.73□□□□□ -0.37
UBA52P62987 MIR4538-201ENST00000581377 78 ntBASIC12.73□□□□□ -0.37
UBA52P62987 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.73□□□□□ -0.37
UBA52P62987 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.73□□□□□ -0.37
UBA52P62987 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 AL158212.4-201ENST00000624062 1286 ntBASIC12.73□□□□□ -0.37
UBA52P62987 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
UBA52P62987 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 BNIP3P1-202ENST00000550043 1585 ntBASIC12.73□□□□□ -0.37
UBA52P62987 KRT8P24-201ENST00000560290 1559 ntBASIC12.73□□□□□ -0.37
UBA52P62987 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBA52P62987 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.73□□□□□ -0.37
UBA52P62987 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.73□□□□□ -0.37
UBA52P62987 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 PDIA3P1-201ENST00000471856 1510 ntBASIC12.72□□□□□ -0.37
UBA52P62987 AL133338.1-201ENST00000565695 1517 ntBASIC12.72□□□□□ -0.37
UBA52P62987 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms