Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CXCR4P61073 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.36□□□□□ -0.27
CXCR4P61073 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
CXCR4P61073 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.35□□□□□ -0.27
CXCR4P61073 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
CXCR4P61073 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 AC004840.1-201ENST00000636359 365 ntBASIC13.35□□□□□ -0.27
CXCR4P61073 DRD5P1-201ENST00000456605 1438 ntBASIC13.35□□□□□ -0.27
CXCR4P61073 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CXCR4P61073 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCR4P61073 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CXCR4P61073 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCR4P61073 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
CXCR4P61073 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CXCR4P61073 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CXCR4P61073 AL138799.1-201ENST00000448213 1675 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCR4P61073 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CXCR4P61073 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CXCR4P61073 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CXCR4P61073 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCR4P61073 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCR4P61073 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCR4P61073 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCR4P61073 KRT18P13-201ENST00000400056 1290 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CXCR4P61073 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.34□□□□□ -0.27
CXCR4P61073 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CXCR4P61073 DNAJB3-202ENST00000449667 1266 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCR4P61073 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.34□□□□□ -0.27
CXCR4P61073 AC097493.3-201ENST00000509725 367 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCR4P61073 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CXCR4P61073 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CXCR4P61073 AL158211.3-201ENST00000607385 239 ntBASIC13.34□□□□□ -0.27
CXCR4P61073 AC107373.2-201ENST00000607735 490 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms