Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 GGTLC4P-201ENST00000402176 664 ntBASIC12.22□□□□□ -0.45
RIPPLY3P57055 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 DPY19L2P5-201ENST00000456300 331 ntBASIC12.22□□□□□ -0.45
RIPPLY3P57055 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 RN7SL602P-201ENST00000578326 324 ntBASIC12.22□□□□□ -0.45
RIPPLY3P57055 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 RN7SL718P-201ENST00000581254 303 ntBASIC12.22□□□□□ -0.45
RIPPLY3P57055 TLE2-205ENST00000586422 389 ntTSL 5 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 SIGLEC18P-201ENST00000602271 909 ntBASIC12.22□□□□□ -0.45
RIPPLY3P57055 AC084781.1-201ENST00000613737 656 ntBASIC12.22□□□□□ -0.45
RIPPLY3P57055 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 AL671710.1-201ENST00000610245 2349 ntBASIC12.22□□□□□ -0.45
RIPPLY3P57055 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RIPPLY3P57055 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RIPPLY3P57055 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 MIR557-201ENST00000385239 98 ntBASIC12.21□□□□□ -0.45
RIPPLY3P57055 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 AL807761.2-201ENST00000422849 729 ntBASIC12.21□□□□□ -0.45
RIPPLY3P57055 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 DUTP3-201ENST00000450025 415 ntBASIC12.21□□□□□ -0.45
RIPPLY3P57055 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 AC006529.1-201ENST00000459978 637 ntBASIC12.21□□□□□ -0.45
RIPPLY3P57055 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 AC124068.2-201ENST00000569473 1109 ntBASIC12.21□□□□□ -0.45
RIPPLY3P57055 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RIPPLY3P57055 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RIPPLY3P57055 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.46
RIPPLY3P57055 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RIPPLY3P57055 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
RIPPLY3P57055 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RIPPLY3P57055 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RIPPLY3P57055 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.21□□□□□ -0.46
RIPPLY3P57055 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RIPPLY3P57055 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
RIPPLY3P57055 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RIPPLY3P57055 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RIPPLY3P57055 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
RIPPLY3P57055 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.21□□□□□ -0.46
RIPPLY3P57055 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
RIPPLY3P57055 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.2□□□□□ -0.46
RIPPLY3P57055 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RIPPLY3P57055 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms