Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.81□□□□□ -0.2
WNT3P56703 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.81□□□□□ -0.2
WNT3P56703 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 FAM197Y7-201ENST00000432892 766 ntBASIC13.81□□□□□ -0.2
WNT3P56703 FAM8A4P-201ENST00000435433 1213 ntBASIC13.81□□□□□ -0.2
WNT3P56703 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
WNT3P56703 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
WNT3P56703 CICP12-201ENST00000455801 843 ntBASIC13.81□□□□□ -0.2
WNT3P56703 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 AC092658.1-201ENST00000505836 891 ntBASIC13.81□□□□□ -0.2
WNT3P56703 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.81□□□□□ -0.2
WNT3P56703 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.81□□□□□ -0.2
WNT3P56703 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.81□□□□□ -0.2
WNT3P56703 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.81□□□□□ -0.2
WNT3P56703 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.81□□□□□ -0.2
WNT3P56703 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
WNT3P56703 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
WNT3P56703 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 CICP17-201ENST00000418553 2377 ntBASIC13.8□□□□□ -0.2
WNT3P56703 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.8□□□□□ -0.2
WNT3P56703 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 FAM86MP-201ENST00000340703 885 ntBASIC13.8□□□□□ -0.2
WNT3P56703 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
WNT3P56703 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.8□□□□□ -0.2
WNT3P56703 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.8□□□□□ -0.2
WNT3P56703 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.8□□□□□ -0.2
WNT3P56703 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.8□□□□□ -0.2
WNT3P56703 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.8□□□□□ -0.2
WNT3P56703 AC073413.1-201ENST00000603927 732 ntBASIC13.8□□□□□ -0.2
WNT3P56703 AL358472.3-201ENST00000608147 415 ntBASIC13.8□□□□□ -0.2
WNT3P56703 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
WNT3P56703 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
WNT3P56703 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
WNT3P56703 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
WNT3P56703 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms