Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.69■□□□□ 0.1
VCPP55072 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.69■□□□□ 0.1
VCPP55072 ENPP7P14-201ENST00000621765 1040 ntBASIC15.69■□□□□ 0.1
VCPP55072 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 AC100757.4-201ENST00000626934 759 ntBASIC15.69■□□□□ 0.1
VCPP55072 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.69■□□□□ 0.1
VCPP55072 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 AC015656.1-201ENST00000624209 3578 ntBASIC15.69■□□□□ 0.1
VCPP55072 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VCPP55072 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.68■□□□□ 0.1
VCPP55072 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.68■□□□□ 0.1
VCPP55072 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.68■□□□□ 0.1
VCPP55072 CEP164P1-201ENST00000455142 418 ntBASIC15.68■□□□□ 0.1
VCPP55072 AC019193.1-201ENST00000506678 823 ntBASIC15.68■□□□□ 0.1
VCPP55072 IGLV3-15-201ENST00000518356 244 ntBASIC15.68■□□□□ 0.1
VCPP55072 AC022616.1-201ENST00000518688 554 ntBASIC15.68■□□□□ 0.1
VCPP55072 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
VCPP55072 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.68■□□□□ 0.1
VCPP55072 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 RN7SL48P-201ENST00000579283 293 ntBASIC15.68■□□□□ 0.1
VCPP55072 AC005357.2-202ENST00000590507 1060 ntBASIC15.68■□□□□ 0.1
VCPP55072 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.68■□□□□ 0.1
VCPP55072 AC004466.1-201ENST00000599515 1080 ntBASIC15.68■□□□□ 0.1
VCPP55072 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VCPP55072 AP001065.2-201ENST00000617205 644 ntBASIC15.68■□□□□ 0.1
VCPP55072 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 OR2I1P-209ENST00000641730 5365 ntBASIC15.68■□□□□ 0.1
VCPP55072 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VCPP55072 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.68■□□□□ 0.1
VCPP55072 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VCPP55072 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.68■□□□□ 0.1
VCPP55072 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VCPP55072 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VCPP55072 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VCPP55072 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.68■□□□□ 0.1
VCPP55072 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
VCPP55072 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VCPP55072 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.67■□□□□ 0.1
VCPP55072 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.67■□□□□ 0.1
VCPP55072 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms