Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 MRPL22P1-201ENST00000505398 616 ntBASIC17.26■□□□□ 0.35
TNNI2P48788 KRT8P1-201ENST00000557533 1207 ntBASIC17.26■□□□□ 0.35
TNNI2P48788 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.26■□□□□ 0.35
TNNI2P48788 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 AL591471.1-201ENST00000621855 229 ntBASIC17.26■□□□□ 0.35
TNNI2P48788 AC025262.2-201ENST00000623975 1056 ntBASIC17.26■□□□□ 0.35
TNNI2P48788 AL161773.1-201ENST00000624845 863 ntBASIC17.26■□□□□ 0.35
TNNI2P48788 AC005618.3-201ENST00000624928 458 ntBASIC17.26■□□□□ 0.35
TNNI2P48788 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.26■□□□□ 0.35
TNNI2P48788 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.26■□□□□ 0.35
TNNI2P48788 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TNNI2P48788 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNNI2P48788 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TNNI2P48788 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.26■□□□□ 0.35
TNNI2P48788 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.26■□□□□ 0.35
TNNI2P48788 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNNI2P48788 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TNNI2P48788 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.25■□□□□ 0.35
TNNI2P48788 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 HLA-DMA-203ENST00000395305 777 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.25■□□□□ 0.35
TNNI2P48788 AL627389.1-201ENST00000413508 1182 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 AC097065.1-201ENST00000425737 517 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 PIN4P1-201ENST00000451079 396 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.25■□□□□ 0.35
TNNI2P48788 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 AC138701.2-201ENST00000553634 226 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 RN7SL470P-201ENST00000583069 259 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 AC084781.1-201ENST00000613737 656 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TNNI2P48788 AC073911.3-201ENST00000624401 631 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 AL132780.4-201ENST00000624870 1135 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.25■□□□□ 0.35
TNNI2P48788 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.25■□□□□ 0.35
TNNI2P48788 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
TNNI2P48788 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNNI2P48788 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
TNNI2P48788 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TNNI2P48788 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TNNI2P48788 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TNNI2P48788 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TNNI2P48788 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.24■□□□□ 0.35
TNNI2P48788 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 MIR3180-2-201ENST00000581748 88 ntBASIC17.24■□□□□ 0.35
TNNI2P48788 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms